Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567879: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318249' containing sample 'VET0077R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 521.1Mb downloads

UUID: 53932fd7-eb24-4cf4-a7c6-32ef91cb2a83

Design: Illumina sequencing of Staphylococcus aureus VET0077R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228502 • SRP042921 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0077R

SAMN02403995 • SRS627032 • All experiments • All runs

Organism: Staphylococcus aureus VET0077R

Library:

Name: Pond-318249

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469882.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8LL

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55037

research_project: RP-513

root_sample_id: SM-4P92G

sample_id: SM-5C8LL

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 521.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330269	2,654,563	536.2M	265.9Mb	2014-06-04
SRR1330402	2,570,089	519.2M	255.3Mb	2014-06-04

ID:: 810696

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